The problem with the older paradigm is that no high energy intermediate was ever found, and the evidence for proton pumping by the complexes of the electron transfer chain grew too great to be ignored. Eventually the weight of evidence began to favor the chemiosmotic hypothesis, and in 1978, Peter Mitchell was awarded the Nobel Prize in Chemistry.
see also: mitochondrion, chloroplasts, chemiosmotic potential, electron_transfer_chain, cytochrome
References:
http://www.life.uiuc.edu/crofts/bioph354/mitchell
http://www.owlnet.rice.edu/~bios301/Bios301/lecture/Lec11-Chemios-photo.pdf
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